Large expert-curated database for benchmarking document similarity detection in biomedical literature search

Brown P.; Zhou Y.; Tan A.-C.; El-Esawi M.A.; Liehr T.; Blanck O.; Gladue D.P.; Almeida G.M.F.; Cernava T.; Sorzano C.O.; Yeung A.W.K.; Engel M.S.; Chandrasekaran A.R.; Muth T.; Staege M.S.; Daulatabad S.V.; Widera D.; Zhang J.; Meule A.; Honjo K.; Pourret O.; Yin C.-C.; Zhang Z.; Cascella M.; Flegel W.A.; Goodyear C.S.; van Raaij M.J.; Bukowy-Bieryllo Z.; Campana L.G.; Kurniawan N.A.; Lalaouna D.; Huttner F.J.; Ammerman B.A.; Ehret F.; Cobine P.A.; Tan E.-C.; Han H.; Xia W.; McCrum C.; Dings R.P.M.; Marinello F.; Nilsson H.; Nixon B.; Voskarides K.; Yang L.; Costa V.D.; Bengtsson-Palme J.; Bradshaw W.; Grimm D.G.; Kumar N.; Martis E.; Prieto D.; Sabnis S.C.; Amer S.E.D.R.; Liew A.W.C.; Perco P.; Rahimi F.; Riva G.; Zhang C.; Devkota H.P.; Ogami K.; Basharat Z.; Fierz W.; Siebers R.; Tan K.H.; Boehme K.A.; Brenneisen P.; Brown J.A.L.; Dalrymple B.P.; Harvey D.J.; Ng G.; Werten S.; Bleackley M.; Dai Z.; Dhariwal R.; Gelfer Y.; Hartmann M.D.; Miotla P.; Tamaian R.; Govender P.; Gurney-Champion O.J.; Kauppila J.H.; Zhang X.; Echeverria N.; Subhash S.; Sallmon H.; Tofani M.; Bae T.; Bosch O.; Cuiv P.O.; Danchin A.; Diouf B.; Eerola T.; Evangelou E.; Filipp F.; Klump H.; Kurgan L.; Smith S.S.; Terrier O.; Tuttle N.; Ascher D.B.; Janga S.C.; Schulte L.N.; Becker D.; Browngardt C.; Bush S.J.; Gaullier G.; Ide K.; Meseko C.; Werner G.D.A.; Zaucha J.; Al-Farha A.A.; Greenwald N.F.; Popoola S.I.; Rahman S.; Xu J.; Yang S.Y.; Hiroi N.; Alper O.M.; Baker C.I.; Bitzer M.; Chacko G.; Debrabant B.; Dixon R.; Forano E.; Gilliham M.; Kelly S.; Klempnauer K.-H.; Lidbury B.A.; Lin M.Z.; Lynch I.; Ma W.; Maibach E.W.; Mather D.E.; Nandakumar K.S.; Ohgami R.S.; Parchi P.; Tressoldi P.; Xue Y.; Armitage C.; Barraud P.; Chatzitheochari S.; Coelho L.P.; Diao J.; Doxey A.C.; Gobet A.; Hu P.; Kaiser S.; Mitchell K.M.; Salama M.F.; Shabalin I.G.; Song H.; Stevanovic D.; Yadollahpour A.; Zeng E.; Zinke K.; Alimba C.G.; Beyene T.J.; Cao Z.; Chan S.S.; Gatchell M.; Kleppe A.; Piotrowski M.; Torga G.; Woldesemayat A.A.; Cosacak M.I.; Haston S.; Ross S.A.; Williams R.; Wong A.; Abramowitz M.K.; Effiong A.; Lee S.; Abid M.B.; Agarabi C.; Alaux C.; Albrecht D.R.; Atkins G.J.; Beck C.R.; Bonvin A.M.J.J.; Bourke E.; Brand T.; Braun R.J.; Bull J.A.; Cardoso P.; Carter D.; Delahay R.M.; Ducommun B.; Duijf P.H.G.; Epp T.; Eskelinen E.-L.; Fallah M.; Farber D.B.; Fernandez-Triana J.; Feyerabend F.; Florio T.; Friebe M.; Furuta S.; Gabrielsen M.; Gruber J.; Grybos M.; Han Q.; Heinrich M.; Helantera H.; Huber M.; Jeltsch A.; Jiang F.; Josse C.; Jurman G.; Kamiya H.; de Keersmaecker K.; Kristiansson E.; de Leeuw F.-E.; Li J.; Liang S.; Lopez-Escamez J.A.; Lopez-Ruiz F.J.; Marchbank K.J.; Marschalek R.; Martin C.S.; Miele A.E.; Montagutelli X.; Morcillo E.; Nicoletti R.; Niehof M.; O'Toole R.; Ohtomo T.; Oster H.; Palma J.-A.; Paterson R.; Peifer M.; Portilla M.; Portillo M.C.; Pritchard A.L.; Pusch S.; Raghava G.P.S.; Roberts N.J.; Ross K.; Schuele B.; Sergeant K.; Shen J.; Stella A.; Sukocheva O.; Uversky V.N.; Vanneste S.; Villet M.H.; Viveiros M.; Vorholt J.A.; Weinstock C.; Yamato M.; Zabetakis I.; Zhao X.; Ziegler A.; Aizat W.M.; Atlas L.; Bridges K.M.; Chakraborty S.; Deschodt M.; Domingues H.S.; Esfahlani S.S.; Falk S.; Guisado J.L.; Kane N.C.; Kueberuwa G.; Lau C.L.; Liang D.; Liu E.; Luu A.M.; Ma C.; Ma L.; Moyer R.; Norris A.D.; Panthee S.; Parsons J.R.; Peng Y.; Pinto I.M.; Reschke C.R.; Sillanpaa E.; Stewart C.J.; Uhle F.; Yang H.; Zhou K.; Zhu S.; Ashry M.; Bergsland N.; Berthold M.; Chen C.-E.; Colella V.; Cuypers M.; Eskew E.A.; Fan X.; Gajda M.; Gonzalezlez-Prendes R.; Goodin A.; Graham E.B.; Groen E.J.N.; Gutierrez-Sacristan A.; Habes M.; Heffler E.; Higginbottom D.B.; Janzen T.; Jayaraman J.; Jibb L.A.; Jongen S.; Kinyanjui T.; Koleva-Kolarova R.G.; Li Z.; Liu Y.-P.; Lund B.A.; Lussier A.A.; Mier P.; Moore M.D.; Nagler K.; Orme M.W.; Pearson J.A.; Prajapati A.S.; Saito Y.; Troder S.E.; Uchendu F.; Verloh N.; Voutchkova D.D.; Abu-Zaid A.; Bakkach J.; Baumert P.; Dono M.; Hanson J.; Herbelet S.; Hobbs E.; Kulkarni A.; Liu S.; Loft N.D.; Reddan T.; Senghore T.; Vindin H.; Xu H.; Bannon R.; Chen B.; Cheung J.T.K.; Cooper J.; Esnakula A.K.; Feghali K.A.; Ghelardi E.; Gnasso A.; Horbar J.; Lai H.M.; Ma R.; Pan Z.; Peres M.A.; Pranata R.; Seow E.; Sydes M.; Testoni I.; Westermair A.L.; Yang Y.; Afnan M.; Albiol J.; Albuquerque L.G.; Amir S.; Amiya E.; Amorim R.M.; An Q.; Andersen S.U.; Aplin J.D.; Argyropoulos C.; Asmann Y.W.; Assaeed A.M.; Atanasov A.G.; Atchison D.A.; Avery S.V.; Avillach P.; Baade P.D.; Backman L.; Badie C.; Baldi A.; Ball E.; Bardot O.; Barnett A.G.; Basner M.; Batra J.; Bazanova O.M.; Beale A.; Beddoe T.; Bell M.L.; Berezikov E.; Berners-Price S.; Bernhardt P.; Berry E.; Bessa T.B.; Billington C.; Birch J.; Blakely R.D.; Blaskovich M.A.T.; Blum R.; Boelaert M.; Bogdanos D.; Bosch C.; Bourgoin T.; Bouvard D.; Boykin L.M.; Bradley G.; Braun D.; Brownlie J.; Bruhl A.; Burt A.; Butler L.M.; Byrareddy S.N.; Byrne H.J.; Cabantous S.; Calatayud S.; Candal E.; Carlson K.; Casillas S.; Castelvetro V.; Caswell P.T.; Cavalli G.; Cerovsky V.; Chagoyen M.; Chen C.-S.; Chen D.F.; Chen H.; Chen J.-T.; Chen Y.; Cheng C.; Cheng J.; Chinapaw M.; Chinopoulos C.; Cho W.C.S.; Chong L.; Chowdhury D.; Chwalibog A.; Ciresi A.; Cockcroft S.; Conesa A.; Cook P.A.; Cooper D.N.; Coqueret O.; Corea E.M.; Costa A.; Costa E.; Coupland C.; Crawford S.Y.; Cruz A.D.; Cui H.; Cui Q.; Culver D.C.; D'Angiulli A.; Dahms T.E.S.; Daigle F.; Dalgleish R.; Danielsen H.E.; Darras S.; Davidson S.M.; Day D.A.; Degirmenci V.; Demaison L.; Devriendt K.; Ding J.; Dogan Y.; Dong X.C.; Donner C.F.; Dressick W.; Drevon C.A.; Duan H.; Ducho C.; Dumaz N.; Dwarakanath B.S.; Ebell M.H.; Eisenhardt S.; Elkum N.; Engel N.; Erickson T.B.; Fairhead M.; Faville M.J.; Fejzo M.S.; Festa F.; Feteira A.; Flood-Page P.; Forsayeth J.; Fox S.A.; Franks S.J.; Frentiu F.D.; Frilander M.J.; Fu X.; Fujita S.; Galea I.; Galluzzi L.; Gani F.; Ganpule A.P.; Garcia-Alix A.; Gedye K.; Giordano M.; Giunta C.; Gleeson P.A.; Goarant C.; Gong H.; Gora D.; Gough M.J.; Goyal R.; Graham K.E.; Grande-Perez A.; Graves P.M.; Greidanus H.; Grice D.; Grunau C.; Gumulya Y.; Guo Y.; Gurevich V.V.; Gusev O.; Hacker E.; Hage S.R.; Hagen G.; Hahn S.; Haller D.M.; Hammerschmidt S.; Han J.; Han R.; Handfield M.; Hapuarachchi H.C.; Harder T.; Hardingham J.E.; Heck M.; Heers M.; Hew K.F.; Higuchi Y.; Hilaire C.St.; Hilton R.; Hodzic E.; Hone A.; Hongoh Y.; Hu G.; Huber H.P.; Hueso L.E.; Huirne J.; Hurt L.; Idborg H.; Ikeo K.; Ingley E.; Jakeman P.M.; Jensen A.; Jia H.; Jia S.; Jiang J.; Jiang X.; Jin Y.; Jo D.; Johnson A.M.; Johnston M.; Jonscher K.R.; Jorens P.G.; Jorgensen J.O.L.; Joubert J.W.; Jung S.-H.; Junior A.M.; Kahan T.; Kamboj S.K.; Kang Y.-K.; Karamanos Y.; Karp N.A.; Kelly R.; Kenna R.; Kennedy J.; Kersten B.; Khalaf R.A.; Khalid J.M.; Khatlani T.; Khider T.; Kijanka G.S.; King S.R.B.; Kluz T.; Knox P.; Kobayashi T.; Koch K.-W.; Kohonen-Corish M.R.J.; Kong X.; Konkle-Parker D.; Korpela K.M.; Kostrikis L.G.; Kraiczy P.; Kratz H.; Krause G.; Krebsbach P.H.; Kristensen S.R.; Kumari P.; Kunimatsu A.; Kurdak H.; Kwon Y.D.; Lachat C.; Lagisz M.; Laky B.; Lammerding J.; Lange M.; Larrosa M.; Laslett A.L.; Laverman G.D.; Leclair E.E.; Lee K.-W.; Lee M.-Y.; Lee M.-S.; Li G.; Lieb K.; Lim Y.Y.; Lindsey M.L.; Line P.-D.; Liu D.; Liu F.; Liu H.; Lloyd V.K.; Lo T.-W.; Locci E.; Loidl J.; Lorenzen J.; Lorkowski S.; Lovell N.H.; Lu H.; Lu W.; Lu Z.; Luengo G.S.; Lundh L.-G.; Lysy P.A.; Mabb A.; Mack H.G.; Mackey D.A.; Mahdavi S.R.; Maher P.; Maher T.; Maity S.N.; Malgrange B.; Mamoulakis C.; Mangoni A.A.; Manke T.; Manstead A.S.R.; Mantalaris A.; Marsal J.; Marschall H.-U.; Martin F.L.; Martinez-Raga J.; Martinez-Salas E.; Mathieu D.; Matsui Y.; Maza E.; McCutcheon J.E.; McKay G.J.; McMillan B.; McMillan N.; Meads C.; Medina L.; Merrick B.A.; Metzger D.W.; Meunier F.A.; Michaelis M.; Micheau O.; Mihara H.; Mintz E.M.; Mizukami T.; Moalic Y.; Mohapatra D.P.; Monteiro A.; Montes M.; Moran J.V.; Morozov S.Y.; Mort M.; Murai N.; Murphy D.J.; Murphy S.K.; Murray S.A.; Naganawa S.; Nammi S.; Nasios G.; Natoli R.M.; Nguyen F.; Nicol C.; van Nieuwerburgh F.; Nilsen E.B.; Nobile C.J.; O'Mahony M.; Ohlsson S.; Olatunbosun O.; Olofsson P.; Ortiz A.; Ostrikov K.; Otto S.; Outeiro T.F.; Ouyang S.; Paganoni S.; Page A.; Palm C.; Paradies Y.; Parsons M.H.; Parsons N.; Pascal P.; Paul E.; Peckham M.; Pedemonte N.; Pellizzon M.A.; Petrelli M.; Pichugin A.; Pinto C.J.C.; Plevris J.N.; Pollesello P.; Polz M.; Ponti G.; Porcelli P.; Prince M.; Quinn G.P.; Quinn T.J.; Ramula S.; Rappsilber J.; Rehfeldt F.; Reiling J.H.; Remacle C.; Rezaei M.; Riddick E.W.; Ritter U.; Roach N.W.; Roberts D.D.; Robles G.; Rodrigues T.; Rodriguez C.; Roislien J.; Roobol M.J.; Rowe A.; Ruepp A.; van Ruitenbeek J.; Rust P.; Saad S.; Sack G.H.; Santos M.; Saudemont A.; Sava G.; Schrading S.; Schramm A.; Schreiber M.; Schuler S.; Schymkowitz J.; Sczyrba A.; Seib K.L.; Shi H.-P.; Shimada T.; Shin J.-S.; Shortt C.; Silveyra P.; Skinner D.; Small I.; Smeets P.A.M.; So P.-W.; Solano F.; Sonenshine D.E.; Song J.; Southall T.; Speakman J.R.; Srinivasan M.V.; Stabile L.P.; Stasiak A.; Steadman K.J.; Stein N.; Stephens A.W.; Stewart D.I.; Stine K.; Storlazzi C.; Stoynova N.V.; Strzalka W.; Suarez O.M.; Sultana T.; Sumant A.V.; Summers M.J.; Sun G.; Tacon P.; Tanaka K.; Tang H.; Tanino Y.; Targett-Adams P.; Tayebi M.; Tayyem R.; Tebbe C.C.; Telfer E.E.; Tempel W.; Teodorczyk-Injeyan J.A.; Thijs G.; Thorne S.; Thrift A.G.; Tiffon C.; Tinnefeld P.; Tjahjono D.H.; Tolle F.; Toth E.; Del Tredici A.L.; Tsapas A.; Tsirigotis K.; Turak A.; Tzotzos G.; Udo E.E.; Utsumi T.; Vaidyanathan S.; Vaillant M.; Valsesia A.; Vandenbroucke R.E.; Veiga F.H.; Vendrell M.; Vesk P.A.; Vickers P.; Victor V.M.; Villemur R.; Vohl M.-C.; Voolstra C.R.; Vuillemin A.; Wakelin S.; Waldron L.; Walsh L.J.; Wang A.Y.; Wang F.; Wang Y.; Watanabe Y.; Weigert A.; Wen J.-C.; Wham C.; White E.P.; Wiener J.; Wilharm G.; Wilkinson S.; Willmann R.; Wilson C.; Wirth B.; Wojan T.R.; Wolff M.; Wong B.M.; Wu T.-W.; Wuerbel H.; Xiao X.; Xu D.; Xu J.W.; Xue B.; Yalcin S.; Yan H.; Yang E.-C.; Yang S.; Yang W.; Ye Y.; Ye Z.-Q.; Yli-Kauhaluoma J.; Yoneyama H.; Yu Y.; Yuan G.-C.; Yuh C.-H.; Zaccolo M.; Zeng C.; Zevnik B.; Zhang L.; Zhang Y.; Zhang Z.-Y.; Zhao Y.; Zhou M.; Zuberbier T.; Aanei C.M.; Ahmad R.; Al-Lawama M.; Alanio A.; Allardyce J.; Alonso-Caneiro D.; Atack J.M.; Baier D.; Bansal A.; Benezeth Y.; Berbesque C.; Berrevoet F.; Biedermann P.H.W.; Bijleveld E.; Bittner F.; Blombach F.; van den Bos W.; Boudreau S.A.; Bramoweth A.D.; Braubach O.; Cai Y.; Campbell M.; Catry T.; Chen X.; Cheng S.; Chung H.-J.; Chavez-Fumagalli M.A.; Conway A.; Costa B.M.; Cyr N.; Dean L.T.; Denzel M.S.; Dlamini S.V.; Dudley K.J.; Dufies M.; Ecke T.; Eckweiler D.; Eixarch E.; El-Adawy H.; Emmrich J.V.; Eustace A.J.; Falter-Wagner C.M.; Farhoudi R.; Fuss J.; Gao J.; Gill M.R.; Gloyn L.; Goggs R.; Govinden U.; Greene G.; Greiff V.; Grundle D.S.; Gruneberg P.; Gumede N.; Haore G.; Harrison P.; Hoenner X.; Hojsgaard D.; Hori H.; Ikonomopoulou M.P.; Jeurissen P.; Johnson D.M.; Kabra D.; Kamagata K.; Karmakar C.; Kasian O.; Kaye L.K.; Khan M.M.; Kim Y.-M.; Kish J.K.; Kobold S.; Kohanbash G.; Kohls G.; Kugler J.-M.; Kumar G.; Lacy-Colson J.; Latif A.; Lauschke V.M.; Li B.; Lim C.J.; Liu X.; Lu J.-J.; Lu Q.; Mahavadi P.; Marzocchi U.; McGarrigle C.A.; van Meerten T.; Min R.; Moal I.; Molari M.; Molleman L.; Mondal S.R.; van de Mortel T.; Moss W.N.; Moultos O.A.; Mukherjee M.; Nakayama K.; Narayan E.; Navaratnarajah; Neumann P.-A.; Nie J.; Nie Y.; Niemeyer F.; Nolan F.; Nwaiwu O.; Oldenmenger W.H.; Olumayede E.; Ou J.; Pallebage-Gamarallage M.; Pearce S.P.; Pelkonen T.; Pelleri M.C.; Pereira J.L.; Pheko M.; Pinto K.A.; Piovesan A.; Pluess M.; Podolsky I.M.; Prescott J.; Qi D.; Qi X.; Raikou V.D.; Ranft A.; Rhodes J.; Rotge J.-Y.; Rowe A.D.; Saggar M.; Schuon R.A.; Shahid S.; Shalchyan V.; Shirvalkar P.; Shiryayev O.; Singh J.; Smout M.J.; Soares A.; Song C.; Srivastava K.; Srivastava R.K.; Sun J.; Szabo A.; Szymanski W.; Tai C.N.P.; Takeuchi H.; Tanadini-Lang S.; Tang F.; Tao W.; Theron G.; Tian C.F.; Tian Y.-S.; Tuttle L.M.; Valenti A.; Verlot P.; Walker M.; Wang J.; Welter D.; Winslade M.; Wu D.; Wu Y.-R.; Xiao H.; Xu B.; Xu Z.; Yang D.; Yang M.; Yankilevich P.; You Y.; Yu C.; Zhan J.; Zhang G.; Zhang K.; Zhang T.; Zhao G.; Zhao J.; Zhou X.; Zhu Z.; Ajani P.A.; Anazodo U.C.; Bagloee S.A.; Bail K.; Bar I.; Bathelt J.; Benkeser D.; Bernier M.L.; Blanchard A.M.; Boakye D.W.; Bonatsos V.; Boon M.H.; Bouboulis G.; Bromfield E.; Brown J.; Bul K.C.M.; Burton K.J.; Butkowski E.G.; Carroll G.; Chao F.; Charrier E.E.; Chen Y.-C.; Chenguang; Choi J.R.; Christoffersen T.; Comel J.C.; Cosse C.; Cui Y.; van Dessel P.; Dhaval; Diodato D.; Duffey M.; Dutt A.; Egea L.G.; El-Said M.; Faye M.; Fernandez-Fernandez B.; Foley K.G.; Founou L.L.; Fu F.; Gadelkareem R.A.; Galimov E.; Garip G.; Gemmill A.; Gouil Q.; Grey J.; Gridneva Z.; Grothe M.J.; Grebert T.; Guerrero F.; Guignard L.; Haenssgen M.J.; Hasler D.; Holgate J.Y.; Huang A.; Hulse-Kemp A.M.; Jean-Quartier C.; Jeon S.-M.; Jia Y.; Jutzeler C.; Kalatzis P.; Karim M.; Karsay K.; Keitel A.; Kempe A.; Keown J.R.; Khoo C.M.; Khwaja N.; Kievit R.A.; Kosanic S.; Koutoukidis D.A.; Kramer P.; Kumar D.; Kirag N.; Lanza G.; Le T.D.; Leem J.W.; Leightley D.; Leite A.; Lercher L.; Li Y.; Lim R.; Lima L.R.A.; Lin L.; Ling T.; Liu Y.; Liu Z.; Lu Y.; Lum F.M.; Luo H.; Machhi J.; Macleod A.; Macwan I.; Madala H.R.; Madani N.; de Maio N.; Makowiecki K.; Mallinson D.J.; Margelyte R.; Maria C.; Markonis Y.; Marsili L.; Mavoa S.; McWilliams L.; Megersa M.; Souto-Maior C.; Menichetti J.; Mercieca-Bebber R.; Miller J.J.; Minde D.-P.M.; Minges A.; Mishra E.; Mishra V.R.; Moores C.; Morrice N.; Moskalensky A.E.; Navarin N.; Negera E.; Nolet P.; Nordberg A.; Norden R.; Nowicki J.P.; Olova N.; Olszewski P.; Onzima R.; Pan C.-L.; Park C.; Park D.I.; Park S.; Patil C.D.; Pedro S.A.; Perry S.R.; Peter J.; Peterson B.M.; Pezzuolo A.; Pozdnyakov I.; Qian S.; Qin L.; Rafe A.; Raote I.; Raza A.; Rebl H.; Refai O.; Regan T.; Richa T.; Richardson M.F.; Robinson K.R.; Rossoni L.; Rouet R.; Safaei S.; Schneeberger P.H.H.; Schwotzer D.; Sebastian A.; Selinski J.; Seltmann S.; Sha F.; Shalev N.; Shang J.-L.; Singer J.; Singh M.; Smith T.; Solomon-Moore E.; Song L.; Soraggi S.; Stanley R.; Steckhan N.; Strobl F.; Subissi L.; Supriyanto I.; Surve C.R.; Suzuki T.; Syme C.; Sorelius K.; Tang Y.; Tantawy M.; Tennakoon S.; Teseo S.; Toelzer C.; Tomov N.; Tovar M.; Tran L.; Tripathi S.; Tuladhar A.M.; Ukubuiwe A.C.; Ung C.O.L.; Valgepea K.; Vatanparast H.; Vidal A.; Wang Q.; Watari R.; Webster R.; Wei J.; Wibowo D.; Wingenbach T.S.H.; Xavier R.M.; Xiao S.; Xiong P.; Xu S.; Yao R.; Yao W.; Yin Q.; Zaitsu M.; Zeineb Z.; Zhan X.-Y.; Zhang R.; Zhang W.; Zheng S.; Zhou B.; Ahmad H.; Akinwumi S.A.; Albery G.F.; Alhowimel A.; Ali J.; Alshehri M.; Alsuhaibani M.; Anikin A.; Azubuike S.O.; Bach-Mortensen A.; Baltiansky L.; Bartas M.; Belachew K.Y.; Bhardwaj V.; Binder K.; Bland N.S.; Boah M.; Bullen B.; Calabro G.E.; Callahan T.J.; Cao B.; Chalmers K.; Chang W.; Che Z.; Chen A.T.Y.; Chen Z.; Choi Y.; Chowdhury M.A.K.; Christensen M.R.; Cooke R.S.C.; Cottini M.; Covington N.V.; Cunningham C.; Delarocque J.; Devos L.; Dhar A.R.; Ding K.-F.; Dong K.; Dong Z.; Dreyer N.; Ekstrand C.; Fardet T.; Feleke B.E.; Feurer T.; Freitas A.; Gao T.; Gebremedhin; Giganti F.; Grabowski P.; Guerra-Mora J.R.; Guo C.; Guo X.; Gupta H.; He S.; Heijne M.; Heinemann S.; Hogrebe A.; Huang Z.; Iskander-Rizk S.; Iyer L.M.; Jahan Y.; James A.S.; Joel E.; Joffroy B.; Jegousse C.; Kambondo G.; Karnati P.; Kaya C.; Ke A.; Kelly D.; Kickert R.; Kidibule P.E.; Kieselmann J.P.; Kim H.J.; Kitazawa T.; Lamberts A.; Liang H.; Linn S.N.; Litfin T.; Liusuo W.; Lygirou V.; Mahato A.K.; Mai Z.-M.; Major R.W.; Mali S.; Mallis P.; Mao W.; Marvin-Dowle K.; Mason L.D.; Merideth B.; Merino-Plaza M.J.; Merlaen B.; Messina R.; Mishra A.K.; Muhammad J.; Musinguzi C.; Nanou A.; Naqash A.; Nguyen J.T.; Nguyen T.T.H.; Ni D.; Nida; Notcovich S.; Ohst B.; Ollivier Q.R.; Osses D.F.; Peng X.; Plantinga A.; Pulia M.; Rafiq M.; Raman A.; Raucher-Chene; Rawski R.; Ray A.; Razak L.A.; Rudolf K.; Rusch P.; Sadoine M.L.; Schmidt A.; Schurr R.; Searles S.; Sharma S.; Sheehan B.; Shi C.; Shohayeb B.; Sommerlad A.; Strehlow J.; Sun X.; Sundar R.; Taherzadeh G.; Tahir N.D.M.; Tang J.; Testa J.; Tian Z.; Tingting Q.; Verheijen G.P.; Vickstrom C.; Wang T.; Wang X.; Wang Z.; Wei P.; Wilson A.; Wyart; Yassine A.-A.; Yousefzadeh A.; Zare A.; Zeng Z.; Zhang H.; Zhou J.; Zhu D.; Adamo V.; Adeyemo A.A.; Aggelidou M.; Al-Owaifeer A.M.; Al-Riyami A.Z.; Alzghari S.K.; Andersen V.; Angus K.; Asaduzzaman M.; Asady H.; Ato D.; Bai X.; Baines R.L.; Ballantyne M.; Ban B.; Beck J.; Ben-Nafa W.; Black E.; Blancher A.; Blankstein R.; Bodagh N.; Borges P.; Brooks A.; Brox-Ponce J.; Brunetti A.; Canham C.D.; Carninci P.; Carvajal R.; Chang S.C.; Chao J.; Chatterjee P.; Chen L.; Chhatriwalla A.K.; Chikowe I.; Chuang T.-J.; Collevatti R.G.; Cornejo D.A.V.; Cuenda A.; Dao M.; Dauga D.; Deng Z.; Devkota K.; Doan L.V.; Elewa Y.H.A.; Fan D.; Faruk M.; Feifei S.; Ferguson T.S.; Fleres F.; Foster E.J.; Foster S.; Furer T.; Gao Y.; Garcia-Rivera E.J.; Gazdar A.; George R.B.; Ghosh S.; Gianchecchi E.; Gleason J.M.; Hackshaw A.; Hall A.; Hall R.; Harper P.; Hogg W.E.; Huang G.; Hunter K.E.; Ijzerman A.P.; Jesus C.; Jian G.; Lewis J.S.; Kanj S.S.; Kaur H.; Kheir F.; Kichatova V.S.; Kiyani M.; Klein R.; Kovesi T.; Kraschnewski J.L.; Kumar A.P.; Labutin D.; Lazo-Langner A.; Leclercq G.; Li M.; Li Q.; Li T.; Liao W.-T.; Liao Z.-Y.; Lin J.; Lizer J.; Lobreglio G.; Lowies C.; Lu C.; Majeed H.; Martin A.; Martinez-Sobrido L.; Meresh E.; Middelveen M.; Mohebbi A.; Mota J.; Mozaheb Z.; Muyaya L.; Nandhakumar A.; Ng S.H.X.; Obeidat M.; Oh D.-H.; Owais M.; Pace-Asciak P.; Panwar A.; Patterson C.; Penagos-Tabaree F.; Pianosi P.T.; Pinzi V.; Pridans C.; Psaroulaki A.; Pujala R.K.; Pulido-Arjona L.; Qi P.-F.; Rahman P.; Rai N.K.; 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Large expert-curated database for benchmarking document similarity detection in biomedical literature search

dc.contributor.author	Brown P.
dc.contributor.author	Zhou Y.
dc.contributor.author	Tan A.-C.
dc.contributor.author	El-Esawi M.A.
dc.contributor.author	Liehr T.
dc.contributor.author	Blanck O.
dc.contributor.author	Gladue D.P.
dc.contributor.author	Almeida G.M.F.
dc.contributor.author	Cernava T.
dc.contributor.author	Sorzano C.O.
dc.contributor.author	Yeung A.W.K.
dc.contributor.author	Engel M.S.
dc.contributor.author	Chandrasekaran A.R.
dc.contributor.author	Muth T.
dc.contributor.author	Staege M.S.
dc.contributor.author	Daulatabad S.V.
dc.contributor.author	Widera D.
dc.contributor.author	Zhang J.
dc.contributor.author	Meule A.
dc.contributor.author	Honjo K.
dc.contributor.author	Pourret O.
dc.contributor.author	Yin C.-C.
dc.contributor.author	Zhang Z.
dc.contributor.author	Cascella M.
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dc.date.accessioned	2024-03-12T23:54:32Z
dc.date.available	2024-03-12T23:54:32Z
dc.date.issued	2019
dc.description.abstract	© The Author(s) 2019. Published by Oxford University Press.Document recommendation systems for locating relevant literature have mostly relied on methods developed a decade ago. This is largely due to the lack of a large offline gold-standard benchmark of relevant documents that cover a variety of research fields such that newly developed literature search techniques can be compared, improved and translated into practice. To overcome this bottleneck, we have established the RElevant LIterature SearcH consortium consisting of more than 1500 scientists from 84 countries, who have collectively annotated the relevance of over 180 000 PubMed-listed articles with regard to their respective seed (input) article/s. The majority of annotations were contributed by highly experienced, original authors of the seed articles. The collected data cover 76% of all unique PubMed Medical Subject Headings descriptors. No systematic biases were observed across different experience levels, research fields or time spent on annotations. More importantly, annotations of the same document pairs contributed by different scientists were highly concordant. We further show that the three representative baseline methods used to generate recommended articles for evaluation (Okapi Best Matching 25, Term Frequency-Inverse Document Frequency and PubMed Related Articles) had similar overall performances. Additionally, we found that these methods each tend to produce distinct collections of recommended articles, suggesting that a hybrid method may be required to completely capture all relevant articles. The established database server located at https://relishdb.ict.griffith.edu.au is freely available for the downloading of annotation data and the blind testing of new methods. We expect that this benchmark will be useful for stimulating the development of new powerful techniques for title and title/abstract-based search engines for relevant articles in biomedical science.
dc.description.firstpage	1
dc.description.lastpage	67
dc.description.volume	2019
dc.identifier.doi	10.1093/database/baz085
dc.identifier.issn	1758-0463
dc.identifier.uri	https://dspace.mackenzie.br/handle/10899/35340
dc.relation.ispartof	Database
dc.rights	Acesso Aberto
dc.title	Large expert-curated database for benchmarking document similarity detection in biomedical literature search
dc.type	Artigo
local.scopus.citations	18
local.scopus.eid	2-s2.0-85082592913
local.scopus.updated	2024-05-01
local.scopus.url	https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=85082592913&origin=inward

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Large expert-curated database for benchmarking document similarity detection in biomedical literature search

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